*Sigh*
To change the faction names you need to alter 6 locations in 2 DLL's (not including the info cards).
nickname = li_n_grp
ids_name = 196846 ----->>NameResources.dll -->>'Liberty Navy'
ids_info = 66200
ids_short_name = 196895 ->>NameResources.dll -->>'Navy'
196846 + 131834 = 328680 --->>OfferBribeResources.dll -->>'Liberty Navy'
328680 + 100 = 328780 --->>OfferBribeResources.dll -->>'the Liberty Navy'
328780 + 100 = 328880 --->>OfferBribeResources.dll -->>'Liberty Navy'
328880 + 100 = 328980 --->>OfferBribeResources.dll -->>'the Liberty Navy'
This also happens to be the method you need to get any custom factions to appear in the bribes and job descriptions.
**shuffles off with a new headache**